Publications | Perceiving Systems - Max Planck Institute for Intelligent Systems

78 results (View BibTeX file of all listed publications)

2009

Ball Joints for Marker-less Human Motion Capture

In IEEE Workshop on Applications of Computer Vision (WACV),, December 2009 (inproceedings)

2009

Pons-Moll, G., Rosenhahn, B. Ball Joints for Marker-less Human Motion Capture In IEEE Workshop on Applications of Computer Vision (WACV),, December 2009 (inproceedings)

pdf [BibTex]

Background Subtraction Based on Rank Constraint for Point Trajectories

Ahmad, A., Del Bue, A., Lima, P.

In pages: 1-3, October 2009 (inproceedings)

Abstract

This work deals with a background subtraction algorithm for a fish-eye lens camera having 3 degrees of freedom, 2 in translation and 1 in rotation. The core assumption in this algorithm is that the background is considered to be composed of a dominant static plane in the world frame. The novelty lies in developing a rank-constraint based background subtraction for equidistant projection model, a property of the fish-eye lens. A detail simulation result is presented to support the hypotheses explained in this paper.

link (url) [BibTex]

Ahmad, A., Del Bue, A., Lima, P. Background Subtraction Based on Rank Constraint for Point Trajectories In pages: 1-3, October 2009 (inproceedings)

link (url) [BibTex]

Parametric Modeling of the Beating Heart with Respiratory Motion Extracted from Magnetic Resonance Images

Pons-Moll, G., Crosas, C., Tadmor, G., MacLeod, R., Rosenhahn, B., Brooks, D.

In IEEE Computers in Cardiology (CINC), September 2009 (inproceedings)

[BibTex]

Pons-Moll, G., Crosas, C., Tadmor, G., MacLeod, R., Rosenhahn, B., Brooks, D. Parametric Modeling of the Beating Heart with Respiratory Motion Extracted from Magnetic Resonance Images In IEEE Computers in Cardiology (CINC), September 2009 (inproceedings)

[BibTex]

Computer cursor control by motor cortical signals in humans with tetraplegia

Kim, S., Simeral, J. D., Hochberg, L. R., Donoghue, J. P., Black, M. J.

In 7th Asian Control Conference, ASCC09, pages: 988-993, Hong Kong, China, August 2009 (inproceedings)

pdf [BibTex]

Kim, S., Simeral, J. D., Hochberg, L. R., Donoghue, J. P., Black, M. J. Computer cursor control by motor cortical signals in humans with tetraplegia In 7th Asian Control Conference, ASCC09, pages: 988-993, Hong Kong, China, August 2009 (inproceedings)

pdf [BibTex]

ISocRob-MSL 2009 Team Description Paper for Middle Sized League

Lima, P., Santos, J., Estilita, J., Barbosa, M., Ahmad, A., Carreira, J.

13th Annual RoboCup International Symposium 2009, July 2009 (techreport)

Abstract

This paper describes the status of the ISocRob MSL roboticsoccer team as required by the RoboCup 2009 qualiﬁcation procedures.Since its previous participation in RoboCup, the ISocRob team has car-ried out signiﬁcant developments in various topics, the most relevantof which are presented here. These include self-localization, 3D objecttracking and cooperative object localization, motion control and rela-tional behaviors. A brief description of the hardware of the ISocRobrobots and of the software architecture adopted by the team is also in-cluded.

[BibTex]

Lima, P., Santos, J., Estilita, J., Barbosa, M., Ahmad, A., Carreira, J. ISocRob-MSL 2009 Team Description Paper for Middle Sized League 13th Annual RoboCup International Symposium 2009, July 2009 (techreport)

[BibTex]

Denoising Fluorescence Endoscopy: A Motion-Compensated Temporal Recursive Video Filter with an Optimal Minimum Mean Square Error Parametrization

Stehle, T., Wulff, J., Behrens, A., Gross, S., Aach, T.

Abstract

Fluorescence endoscopy is an emerging technique for the detection of bladder cancer. A marker substance is brought into the patient's bladder which accumulates at cancer tissue. If a suitable narrow band light source is used for illumination, a red fluorescence of the marker substance is observable. Because of the low fluorescence photon count and because of the narrow band light source, only a small amount of light is detected by the camera's CCD sensor. This, in turn, leads to strong noise in the recorded video sequence. To overcome this problem, we apply a temporal recursive filter to the video sequence. The derivation of a filter function is presented, which leads to an optimal filter in the minimum mean square error sense. The algorithm is implemented as plug-in for the real-time capable clinical demonstrator platform RealTimeFrame and it is capable to process color videos with a resolution of 768times576 pixels at 50 frames per second.

pdf link (url) DOI [BibTex]

Stehle, T., Wulff, J., Behrens, A., Gross, S., Aach, T. Denoising Fluorescence Endoscopy: A Motion-Compensated Temporal Recursive Video Filter with an Optimal Minimum Mean Square Error Parametrization

pdf link (url) DOI [BibTex]

Fields of Experts

Roth, S., Black, M. J.

International Journal of Computer Vision (IJCV), 82(2):205-29, April 2009 (article)

Abstract

We develop a framework for learning generic, expressive image priors that capture the statistics of natural scenes and can be used for a variety of machine vision tasks. The approach provides a practical method for learning high-order Markov random field (MRF) models with potential functions that extend over large pixel neighborhoods. These clique potentials are modeled using the Product-of-Experts framework that uses non-linear functions of many linear filter responses. In contrast to previous MRF approaches all parameters, including the linear filters themselves, are learned from training data. We demonstrate the capabilities of this Field-of-Experts model with two example applications, image denoising and image inpainting, which are implemented using a simple, approximate inference scheme. While the model is trained on a generic image database and is not tuned toward a specific application, we obtain results that compete with specialized techniques.

pdf pdf from publisher [BibTex]

Roth, S., Black, M. J. Fields of Experts International Journal of Computer Vision (IJCV), 82(2):205-29, April 2009 (article)

pdf pdf from publisher [BibTex]

Classification of colon polyps in NBI endoscopy using vascularization features

Stehle, T., Auer, R., Gross, S., Behrens, A., Wulff, J., Aach, T., Winograd, R., Trautwein, C., Tischendorf, J.

In Medical Imaging 2009: Computer-Aided Diagnosis, 7260, (Editors: N. Karssemeijer and M. L. Giger), SPIE, February 2009 (inproceedings)

Abstract

The evolution of colon cancer starts with colon polyps. There are two different types of colon polyps, namely hyperplasias and adenomas. Hyperplasias are benign polyps which are known not to evolve into cancer and, therefore, do not need to be removed. By contrast, adenomas have a strong tendency to become malignant. Therefore, they have to be removed immediately via polypectomy. For this reason, a method to differentiate reliably adenomas from hyperplasias during a preventive medical endoscopy of the colon (colonoscopy) is highly desirable. A recent study has shown that it is possible to distinguish both types of polyps visually by means of their vascularization. Adenomas exhibit a large amount of blood vessel capillaries on their surface whereas hyperplasias show only few of them. In this paper, we show the feasibility of computer-based classification of colon polyps using vascularization features. The proposed classification algorithm consists of several steps: For the critical part of vessel segmentation, we implemented and compared two segmentation algorithms. After a skeletonization of the detected blood vessel candidates, we used the results as seed points for the Fast Marching algorithm which is used to segment the whole vessel lumen. Subsequently, features are computed from this segmentation which are then used to classify the polyps. In leave-one-out tests on our polyp database (56 polyps), we achieve a correct classification rate of approximately 90%.

DOI [BibTex]

Stehle, T., Auer, R., Gross, S., Behrens, A., Wulff, J., Aach, T., Winograd, R., Trautwein, C., Tischendorf, J. Classification of colon polyps in NBI endoscopy using vascularization features In Medical Imaging 2009: Computer-Aided Diagnosis, 7260, (Editors: N. Karssemeijer and M. L. Giger), SPIE, February 2009 (inproceedings)

DOI [BibTex]

One-shot scanning using de bruijn spaced grids

Ulusoy, A., Calakli, F., Taubin, G.

In Computer Vision Workshops (ICCV Workshops), 2009 IEEE 12th International Conference on, pages: 1786-1792, IEEE, 2009 (inproceedings)

Abstract

In this paper we present a new one-shot method to reconstruct the shape of dynamic 3D objects and scenes based on active illumination. In common with other related prior-art methods, a static grid pattern is projected onto the scene, a video sequence of the illuminated scene is captured, a shape estimate is produced independently for each video frame, and the one-shot property is realized at the expense of space resolution. The main challenge in grid-based one-shot methods is to engineer the pattern and algorithms so that the correspondence between pattern grid points and their images can be established very fast and without uncertainty. We present an efficient one-shot method which exploits simple geometric constraints to solve the correspondence problem. We also introduce De Bruijn spaced grids, a novel grid pattern, and show with strong empirical data that the resulting scheme is much more robust compared to those based on uniform spaced grids.

pdf link (url) DOI [BibTex]

Ulusoy, A., Calakli, F., Taubin, G. One-shot scanning using de bruijn spaced grids In Computer Vision Workshops (ICCV Workshops), 2009 IEEE 12th International Conference on, pages: 1786-1792, IEEE, 2009 (inproceedings)

pdf link (url) DOI [BibTex]

An introduction to Kernel Learning Algorithms

Gehler, P., Schölkopf, B.

In Kernel Methods for Remote Sensing Data Analysis, pages: 25-48, 2, (Editors: Gustavo Camps-Valls and Lorenzo Bruzzone), Wiley, New York, NY, USA, 2009 (inbook)

Abstract

Kernel learning algorithms are currently becoming a standard tool in the area of machine learning and pattern recognition. In this chapter we review the fundamental theory of kernel learning. As the basic building block we introduce the kernel function, which provides an elegant and general way to compare possibly very complex objects. We then review the concept of a reproducing kernel Hilbert space and state the representer theorem. Finally we give an overview of the most prominent algorithms, which are support vector classification and regression, Gaussian Processes and kernel principal analysis. With multiple kernel learning and structured output prediction we also introduce some more recent advancements in the field.

link (url) DOI [BibTex]

Gehler, P., Schölkopf, B. An introduction to Kernel Learning Algorithms In Kernel Methods for Remote Sensing Data Analysis, pages: 25-48, 2, (Editors: Gustavo Camps-Valls and Lorenzo Bruzzone), Wiley, New York, NY, USA, 2009 (inbook)

link (url) DOI [BibTex]

Estimating human shape and pose from a single image

Guan, P., Weiss, A., Balan, A., Black, M. J.

In Int. Conf. on Computer Vision, ICCV, pages: 1381-1388, 2009 (inproceedings)

pdf video - mov 25MB video - mp4 10MB YouTube Project Page [BibTex]

Guan, P., Weiss, A., Balan, A., Black, M. J. Estimating human shape and pose from a single image In Int. Conf. on Computer Vision, ICCV, pages: 1381-1388, 2009 (inproceedings)

pdf video - mov 25MB video - mp4 10MB YouTube Project Page [BibTex]

On feature combination for multiclass object classification

Gehler, P., Nowozin, S.

In Proceedings of the Twelfth IEEE International Conference on Computer Vision, pages: 221-228, 2009, oral presentation (inproceedings)

project page, code, data GoogleScholar pdf DOI [BibTex]

Gehler, P., Nowozin, S. On feature combination for multiclass object classification In Proceedings of the Twelfth IEEE International Conference on Computer Vision, pages: 221-228, 2009, oral presentation (inproceedings)

project page, code, data GoogleScholar pdf DOI [BibTex]

Segmentation, Ordering and Multi-object Tracking Using Graphical Models

Wang, C., Gorce, M. D. L., Paragios, N.

In IEEE International Conference on Computer Vision (ICCV), 2009 (inproceedings)

pdf [BibTex]

Wang, C., Gorce, M. D. L., Paragios, N. Segmentation, Ordering and Multi-object Tracking Using Graphical Models In IEEE International Conference on Computer Vision (ICCV), 2009 (inproceedings)

pdf [BibTex]

Visual Object Discovery

Sinha, P., Balas, B., Ostrovsky, Y., Wulff, J.

In Object Categorization: Computer and Human Vision Perspectives, pages: 301-323, (Editors: S. J. Dickinson, A. Leonardis, B. Schiele, M.J. Tarr), Cambridge University Press, 2009 (inbook)

link (url) [BibTex]

Sinha, P., Balas, B., Ostrovsky, Y., Wulff, J. Visual Object Discovery In Object Categorization: Computer and Human Vision Perspectives, pages: 301-323, (Editors: S. J. Dickinson, A. Leonardis, B. Schiele, M.J. Tarr), Cambridge University Press, 2009 (inbook)

link (url) [BibTex]

Evaluating the potential of primary motor and premotor cortex for mutltidimensional neuroprosthetic control of complete reaching and grasping actions

Vargas-Irwin, C. E., Yadollahpour, P., Shakhnarovich, G., Black, M. J., Donoghue, J. P.

2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009, Online (conference)

[BibTex]

Vargas-Irwin, C. E., Yadollahpour, P., Shakhnarovich, G., Black, M. J., Donoghue, J. P. Evaluating the potential of primary motor and premotor cortex for mutltidimensional neuroprosthetic control of complete reaching and grasping actions 2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009, Online (conference)

[BibTex]

Modeling and Evaluation of Human-to-Robot Mapping of Grasps

Romero, J., Kjellström, H., Kragic, D.

In International Conference on Advanced Robotics (ICAR), pages: 1-6, 2009 (inproceedings)

Pdf [BibTex]

Romero, J., Kjellström, H., Kragic, D. Modeling and Evaluation of Human-to-Robot Mapping of Grasps In International Conference on Advanced Robotics (ICAR), pages: 1-6, 2009 (inproceedings)

Pdf [BibTex]

Polyp Segmentation in NBI Colonoscopy

Gross, S., Kennel, M., Stehle, T., Wulff, J., Tischendorf, J., Trautwein, C., Aach, T.

Abstract

Endoscopic screening of the colon (colonoscopy) is performed to prevent cancer and to support therapy. During intervention colon polyps are located, inspected and, if need be, removed by the investigator. We propose a segmentation algorithm as a part of an automatic polyp classification system for colonoscopic Narrow-Band images. Our approach includes multi-scale filtering for noise reduction, suppression of small blood vessels, and enhancement of major edges. Results of the subsequent edge detection are compared to a set of elliptic templates and evaluated. We validated our algorithm on our polyp database with images acquired during routine colonoscopic examinations. The presented results show the reliable segmentation performance of our method and its robustness to image variations.

link (url) DOI [BibTex]

Gross, S., Kennel, M., Stehle, T., Wulff, J., Tischendorf, J., Trautwein, C., Aach, T. Polyp Segmentation in NBI Colonoscopy

link (url) DOI [BibTex]

An additive latent feature model for transparent object recognition

Fritz, M., Black, M., Bradski, G., Karayev, S., Darrell, T.

In Advances in Neural Information Processing Systems 22, NIPS, pages: 558-566, MIT Press, 2009 (inproceedings)

pdf slides [BibTex]

Fritz, M., Black, M., Bradski, G., Karayev, S., Darrell, T. An additive latent feature model for transparent object recognition In Advances in Neural Information Processing Systems 22, NIPS, pages: 558-566, MIT Press, 2009 (inproceedings)

pdf slides [BibTex]

Automatic recognition of rodent behavior: A tool for systematic phenotypic analysis

Serre, T.*, Jhuang, H*., Garrote, E., Poggio, T., Steele, A.

CBCL paper #283/MIT-CSAIL-TR #2009-052., MIT, 2009 (techreport)

pdf [BibTex]

Serre, T.*, Jhuang, H*., Garrote, E., Poggio, T., Steele, A. Automatic recognition of rodent behavior: A tool for systematic phenotypic analysis CBCL paper #283/MIT-CSAIL-TR #2009-052., MIT, 2009 (techreport)

pdf [BibTex]

Let the kernel figure it out; Principled learning of pre-processing for kernel classifiers

Gehler, P., Nowozin, S.

In Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR), pages: 2836-2843, IEEE Computer Society, 2009 (inproceedings)

doi project page pdf [BibTex]

Gehler, P., Nowozin, S. Let the kernel figure it out; Principled learning of pre-processing for kernel classifiers In Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR), pages: 2836-2843, IEEE Computer Society, 2009 (inproceedings)

doi project page pdf [BibTex]

Monocular Real-Time 3D Articulated Hand Pose Estimation

Romero, J., Kjellström, H., Kragic, D.

In IEEE-RAS International Conference on Humanoid Robots, pages: 87-92, 2009 (inproceedings)

Pdf [BibTex]

Romero, J., Kjellström, H., Kragic, D. Monocular Real-Time 3D Articulated Hand Pose Estimation In IEEE-RAS International Conference on Humanoid Robots, pages: 87-92, 2009 (inproceedings)

Pdf [BibTex]

Grasp Recognition and Mapping on Humanoid Robots

Do, M., Romero, J., Kjellström, H., Azad, P., Asfour, T., Kragic, D., Dillmann, R.

In IEEE-RAS International Conference on Humanoid Robots, pages: 465-471, 2009 (inproceedings)

Pdf Video [BibTex]

Do, M., Romero, J., Kjellström, H., Azad, P., Asfour, T., Kragic, D., Dillmann, R. Grasp Recognition and Mapping on Humanoid Robots In IEEE-RAS International Conference on Humanoid Robots, pages: 465-471, 2009 (inproceedings)

Pdf Video [BibTex]

4D Cardiac Segmentation of the Epicardium and Left Ventricle

Pons-Moll, G., Tadmor, G., MacLeod, R. S., Rosenhahn, B., Brooks, D. H.

In World Congress of Medical Physics and Biomedical Engineering (WC), 2009 (inproceedings)

[BibTex]

Pons-Moll, G., Tadmor, G., MacLeod, R. S., Rosenhahn, B., Brooks, D. H. 4D Cardiac Segmentation of the Epicardium and Left Ventricle In World Congress of Medical Physics and Biomedical Engineering (WC), 2009 (inproceedings)

[BibTex]

Geometric Potential Force for the Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 20th British Machine Vision Conference, pages: 1-11, 2009 (inproceedings)

Abstract

We propose a new external force field for deformable models which can be conve- niently generalized to high dimensions. The external force field is based on hypothesized interactions between the relative geometries of the deformable model and image gradi- ents. The evolution of the deformable model is solved using the level set method. The dynamic interaction forces between the geometries can greatly improve the deformable model performance in acquiring complex geometries and highly concave boundaries, and in dealing with weak image edges. The new deformable model can handle arbi- trary cross-boundary initializations. Here, we show that the proposed method achieve significant improvements when compared against existing state-of-the-art techniques.

[BibTex]

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu Geometric Potential Force for the Deformable Model In The 20th British Machine Vision Conference, pages: 1-11, 2009 (inproceedings)

[BibTex]

Left Ventricular Regional Wall Curvedness and Wall Stress in Patients with Ischemic Dilated Cardiomyopathy

Liang Zhong, Yi Su, Si Yong Yeo, Ru San Tan Dhanjoo Ghista, Ghassan Kassab

American Journal of Physiology – Heart and Circulatory Physiology, 296(3):H573-84, 2009 (article)

Abstract

Geometric remodeling of the left ventricle (LV) after myocardial infarction is associated with changes in myocardial wall stress. The objective of this study was to determine the regional curvatures and wall stress based on three-dimensional (3-D) reconstructions of the LV using MRI. Ten patients with ischemic dilated cardiomyopathy (IDCM) and 10 normal subjects underwent MRI scan. The IDCM patients also underwent delayed gadolinium-enhancement imaging to delineate the extent of myocardial infarct. Regional curvedness, local radii of curvature, and wall thickness were calculated. The percent curvedness change between end diastole and end systole was also calculated. In normal heart, a short- and long-axis two-dimensional analysis showed a 41 +/- 11% and 45 +/- 12% increase of the mean of peak systolic wall stress between basal and apical sections, respectively. However, 3-D analysis showed no significant difference in peak systolic wall stress from basal and apical sections (P = 0.298, ANOVA). LV shape differed between IDCM patients and normal subjects in several ways: LV shape was more spherical (sphericity index = 0.62 +/- 0.08 vs. 0.52 +/- 0.06, P < 0.05), curvedness at end diastole (mean for 16 segments = 0.034 +/- 0.0056 vs. 0.040 +/- 0.0071 mm(-1), P < 0.001) and end systole (mean for 16 segments = 0.037 +/- 0.0068 vs. 0.067 +/- 0.020 mm(-1), P < 0.001) was affected by infarction, and peak systolic wall stress was significantly increased at each segment in IDCM patients. The 3-D quantification of regional wall stress by cardiac MRI provides more precise evaluation of cardiac mechanics. Identification of regional curvedness and wall stresses helps delineate the mechanisms of LV remodeling in IDCM and may help guide therapeutic LV restoration.

[BibTex]

Liang Zhong, Yi Su, Si Yong Yeo, Ru San Tan Dhanjoo Ghista, Ghassan Kassab Left Ventricular Regional Wall Curvedness and Wall Stress in Patients with Ischemic Dilated Cardiomyopathy American Journal of Physiology – Heart and Circulatory Physiology, 296(3):H573-84, 2009 (article)

[BibTex]

Level Set Based Automatic Segmentation of Human Aorta

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In International Conference on Computational & Mathematical Biomedical Engineering, pages: 242-245, 2009 (inproceedings)

[BibTex]

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu Level Set Based Automatic Segmentation of Human Aorta In International Conference on Computational & Mathematical Biomedical Engineering, pages: 242-245, 2009 (inproceedings)

[BibTex]

A Curvature-Based Approach for Left Ventricular Shape Analysis from Cardiac Magnetic Resonance Imaging

Si Yong Yeo, Liang Zhong, Yi Su, Ru San Tan, Dhanjoo Ghista

Medical & Biological Engineering & Computing, 47(3):313-322, 2009 (article)

Abstract

It is believed that left ventricular (LV) regional shape is indicative of LV regional function, and cardiac pathologies are often associated with regional alterations in ventricular shape. In this article, we present a set of procedures for evaluating regional LV surface shape from anatomically accurate models reconstructed from cardiac magnetic resonance (MR) images. LV surface curvatures are computed using local surface fitting method, which enables us to assess regional LV shape and its variation. Comparisons are made between normal and diseased hearts. It is illustrated that LV surface curvatures at different regions of the normal heart are higher than those of the diseased heart. Also, the normal heart experiences a larger change in regional curvedness during contraction than the diseased heart. It is believed that with a wide range of dataset being evaluated, this approach will provide a new and efficient way of quantifying LV regional function.

link (url) [BibTex]

Si Yong Yeo, Liang Zhong, Yi Su, Ru San Tan, Dhanjoo Ghista A Curvature-Based Approach for Left Ventricular Shape Analysis from Cardiac Magnetic Resonance Imaging Medical & Biological Engineering & Computing, 47(3):313-322, 2009 (article)

link (url) [BibTex]

In Defense of Orthonormality Constraints for Nonrigid Structure from Motion

Akhter, I., Sheikh, Y., Khan, S.

In Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pages: 2447-2453, 2009 (inproceedings)

Abstract

In factorization approaches to nonrigid structure from motion, the 3D shape of a deforming object is usually modeled as a linear combination of a small number of basis shapes. The original approach to simultaneously estimate the shape basis and nonrigid structure exploited orthonormality constraints for metric rectification. Recently, it has been asserted that structure recovery through orthonormality constraints alone is inherently ambiguous and cannot result in a unique solution. This assertion has been accepted as conventional wisdom and is the justification of many remedial heuristics in literature. Our key contribution is to prove that orthonormality constraints are in fact sufficient to recover the 3D structure from image observations alone. We characterize the true nature of the ambiguity in using orthonormality constraints for the shape basis and show that it has no impact on structure reconstruction. We conclude from our experimentation that the primary challenge in using shape basis for nonrigid structure from motion is the difficulty in the optimization problem rather than the ambiguity in orthonormality constraints.

pdf [BibTex]

Akhter, I., Sheikh, Y., Khan, S. In Defense of Orthonormality Constraints for Nonrigid Structure from Motion In Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pages: 2447-2453, 2009 (inproceedings)

pdf [BibTex]

Dynamic distortion correction for endoscopy systems with exchangeable optics

Stehle, T., Hennes, M., Gross, S., Behrens, A., Wulff, J., Aach, T.

In Bildverarbeitung für die Medizin 2009, pages: 142-146, Springer Berlin Heidelberg, 2009 (inproceedings)

Abstract

Endoscopic images are strongly affected by lens distortion caused by the use of wide angle lenses. In case of endoscopy systems with exchangeable optics, e.g. in bladder endoscopy or sinus endoscopy, the camera sensor and the optics do not form a rigid system but they can be shifted and rotated with respect to each other during an examination. This flexibility has a major impact on the location of the distortion centre as it is moved along with the optics. In this paper, we describe an algorithm for the dynamic correction of lens distortion in cystoscopy which is based on a one time calibration. For the compensation, we combine a conventional static method for distortion correction with an algorithm to detect the position and the orientation of the elliptic field of view. This enables us to estimate the position of the distortion centre according to the relative movement of camera and optics. Therewith, a distortion correction for arbitrary rotation angles and shifts becomes possible without performing static calibrations for every possible combination of shifts and angles beforehand.

link (url) DOI [BibTex]

Stehle, T., Hennes, M., Gross, S., Behrens, A., Wulff, J., Aach, T. Dynamic distortion correction for endoscopy systems with exchangeable optics In Bildverarbeitung für die Medizin 2009, pages: 142-146, Springer Berlin Heidelberg, 2009 (inproceedings)

link (url) DOI [BibTex]

Computational mechanisms for the recognition of time sequences of images in the visual cortex

Tan, C., Jhuang, H., Singer, J., Serre, T., Sheinberg, D., Poggio, T.

Society for Neuroscience, 2009 (conference)

pdf [BibTex]

Tan, C., Jhuang, H., Singer, J., Serre, T., Sheinberg, D., Poggio, T. Computational mechanisms for the recognition of time sequences of images in the visual cortex Society for Neuroscience, 2009 (conference)

pdf [BibTex]

Interactive Inverse Kinematics for Monocular Motion Estimation

Morten Engell-Norregaard, Soren Hauberg, Jerome Lapuyade, Kenny Erleben, Kim S. Pedersen

In The 6th Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS), 2009 (inproceedings)

Conference site Paper site [BibTex]

Morten Engell-Norregaard, Soren Hauberg, Jerome Lapuyade, Kenny Erleben, Kim S. Pedersen Interactive Inverse Kinematics for Monocular Motion Estimation In The 6th Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS), 2009 (inproceedings)

Conference site Paper site [BibTex]

A Comprehensive Grasp Taxonomy

Feix, T., Pawlik, R., Schmiedmayer, H., Romero, J., Kragic, D.

In Robotics, Science and Systems: Workshop on Understanding the Human Hand for Advancing Robotic Manipulation, 2009 (inproceedings)

Pdf [BibTex]

Feix, T., Pawlik, R., Schmiedmayer, H., Romero, J., Kragic, D. A Comprehensive Grasp Taxonomy In Robotics, Science and Systems: Workshop on Understanding the Human Hand for Advancing Robotic Manipulation, 2009 (inproceedings)

Pdf [BibTex]

Population coding of ground truth motion in natural scenes in the early visual system

Stanley, G., Black, M. J., Lewis, J., Desbordes, G., Jin, J., Alonso, J.

COSYNE, 2009 (conference)

[BibTex]

Stanley, G., Black, M. J., Lewis, J., Desbordes, G., Jin, J., Alonso, J. Population coding of ground truth motion in natural scenes in the early visual system COSYNE, 2009 (conference)

[BibTex]

Segmentation of Human Upper Airway Using a Level Set Based Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 13th Medical Image Understanding and Analysis, 2009 (inproceedings)

[BibTex]

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu Segmentation of Human Upper Airway Using a Level Set Based Deformable Model In The 13th Medical Image Understanding and Analysis, 2009 (inproceedings)

[BibTex]

Three Dimensional Monocular Human Motion Analysis in End-Effector Space

Soren Hauberg, Jerome Lapuyade, Morten Engell-Norregaard, Kenny Erleben, Kim S. Pedersen

In Energy Minimization Methods in Computer Vision and Pattern Recognition, 5681, pages: 235-248, Lecture Notes in Computer Science, (Editors: Cremers, Daniel and Boykov, Yuri and Blake, Andrew and Schmidt, Frank), Springer Berlin Heidelberg, 2009 (inproceedings)

Publishers site Paper site PDF [BibTex]

Soren Hauberg, Jerome Lapuyade, Morten Engell-Norregaard, Kenny Erleben, Kim S. Pedersen Three Dimensional Monocular Human Motion Analysis in End-Effector Space In Energy Minimization Methods in Computer Vision and Pattern Recognition, 5681, pages: 235-248, Lecture Notes in Computer Science, (Editors: Cremers, Daniel and Boykov, Yuri and Blake, Andrew and Schmidt, Frank), Springer Berlin Heidelberg, 2009 (inproceedings)

Publishers site Paper site PDF [BibTex]

Decoding visual motion from correlated firing of thalamic neurons

Stanley, G. B., Black, M. J., Desbordes, G., Jin, J., Wang, Y., Alonso, J.

2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009 (conference)

[BibTex]

Stanley, G. B., Black, M. J., Desbordes, G., Jin, J., Wang, Y., Alonso, J. Decoding visual motion from correlated firing of thalamic neurons 2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009 (conference)

[BibTex]

2008

Learning Optical Flow

Sun, D., Roth, S., Lewis, J., Black, M. J.

In European Conf. on Computer Vision, ECCV, 5304, pages: 83-97, LNCS, (Editors: Forsyth, D. and Torr, P. and Zisserman, A.), Springer-Verlag, October 2008 (inproceedings)

Abstract

Assumptions of brightness constancy and spatial smoothness underlie most optical flow estimation methods. In contrast to standard heuristic formulations, we learn a statistical model of both brightness constancy error and the spatial properties of optical flow using image sequences with associated ground truth flow fields. The result is a complete probabilistic model of optical flow. Specifically, the ground truth enables us to model how the assumption of brightness constancy is violated in naturalistic sequences, resulting in a probabilistic model of "brightness inconstancy". We also generalize previous high-order constancy assumptions, such as gradient constancy, by modeling the constancy of responses to various linear filters in a high-order random field framework. These filters are free variables that can be learned from training data. Additionally we study the spatial structure of the optical flow and how motion boundaries are related to image intensity boundaries. Spatial smoothness is modeled using a Steerable Random Field, where spatial derivatives of the optical flow are steered by the image brightness structure. These models provide a statistical motivation for previous methods and enable the learning of all parameters from training data. All proposed models are quantitatively compared on the Middlebury flow dataset.

pdf Springerlink version [BibTex]

2008

Sun, D., Roth, S., Lewis, J., Black, M. J. Learning Optical Flow In European Conf. on Computer Vision, ECCV, 5304, pages: 83-97, LNCS, (Editors: Forsyth, D. and Torr, P. and Zisserman, A.), Springer-Verlag, October 2008 (inproceedings)

pdf Springerlink version [BibTex]

GNU Octave Manual Version 3

John W. Eaton, David Bateman, Soren Hauberg

Network Theory Ltd., October 2008 (book)

Publishers site GNU Octave [BibTex]

John W. Eaton, David Bateman, Soren Hauberg GNU Octave Manual Version 3 Network Theory Ltd., October 2008 (book)

Publishers site GNU Octave [BibTex]

Probabilistic Roadmap Method and Real Time Gait Changing Technique Implementation for Travel Time Optimization on a Designed Six-legged Robot

Ahmad, A., Dhang, N.

In pages: 1-5, October 2008 (inproceedings)

Abstract

This paper presents design and development of a six legged robot with a total of 12 degrees of freedom, two in each limb and then an implementation of 'obstacle and undulated terrain-based' probabilistic roadmap method for motion planning of this hexaped which is able to negotiate large undulations as obstacles. The novelty in this implementation is that, it doesnt require the complete view of the robot's configuration space at any given time during the traversal. It generates a map of the area that is in visibility range and finds the best suitable point in that field of view to make it as the next node of the algorithm. A particular category of undulations which are small enough are automatically 'run-over' as a part of the terrain and not considered as obstacles. The traversal between the nodes is optimized by taking the shortest path and the most optimum gait at that instance which the hexaped can assume. This is again a novel approach to have a real time gait changing technique to optimize the travel time. The hexaped limb can swing in the robot's X-Y plane and the lower link of the limb can move in robot's Z plane by an implementation of a four-bar mechanism. A GUI based server 'Yellow Ladybird' eventually which is the name of the hexaped, is made for real time monitoring and communicating to it the final destination co-ordinates.

link (url) [BibTex]

Ahmad, A., Dhang, N. Probabilistic Roadmap Method and Real Time Gait Changing Technique Implementation for Travel Time Optimization on a Designed Six-legged Robot In pages: 1-5, October 2008 (inproceedings)

link (url) [BibTex]

The naked truth: Estimating body shape under clothing,

Balan, A., Black, M. J.

In European Conf. on Computer Vision, ECCV, 5304, pages: 15-29, LNCS, (Editors: D. Forsyth and P. Torr and A. Zisserman), Springer-Verlag, Marseilles, France, October 2008 (inproceedings)

Abstract

We propose a method to estimate the detailed 3D shape of a person from images of that person wearing clothing. The approach exploits a model of human body shapes that is learned from a database of over 2000 range scans. We show that the parameters of this shape model can be recovered independently of body pose. We further propose a generalization of the visual hull to account for the fact that observed silhouettes of clothed people do not provide a tight bound on the true 3D shape. With clothed subjects, different poses provide different constraints on the possible underlying 3D body shape. We consequently combine constraints across pose to more accurately estimate 3D body shape in the presence of occluding clothing. Finally we use the recovered 3D shape to estimate the gender of subjects and then employ gender-specific body models to refine our shape estimates. Results on a novel database of thousands of images of clothed and "naked" subjects, as well as sequences from the HumanEva dataset, suggest the method may be accurate enough for biometric shape analysis in video.

pdf pdf with higher quality images Springerlink version YouTube video on applications data slides [BibTex]

Balan, A., Black, M. J. The naked truth: Estimating body shape under clothing, In European Conf. on Computer Vision, ECCV, 5304, pages: 15-29, LNCS, (Editors: D. Forsyth and P. Torr and A. Zisserman), Springer-Verlag, Marseilles, France, October 2008 (inproceedings)

pdf pdf with higher quality images Springerlink version YouTube video on applications data slides [BibTex]

Infinite Kernel Learning

Gehler, P., Nowozin, S.

(178), Max Planck Institute, octomber 2008 (techreport)

project page pdf [BibTex]

Gehler, P., Nowozin, S. Infinite Kernel Learning (178), Max Planck Institute, octomber 2008 (techreport)

project page pdf [BibTex]

A non-parametric Bayesian alternative to spike sorting

Wood, F., Black, M. J.

J. Neuroscience Methods, 173(1):1–12, August 2008 (article)

Abstract

The analysis of extra-cellular neural recordings typically begins with careful spike sorting and all analysis of the data then rests on the correctness of the resulting spike trains. In many situations this is unproblematic as experimental and spike sorting procedures often focus on well isolated units. There is evidence in the literature, however, that errors in spike sorting can occur even with carefully collected and selected data. Additionally, chronically implanted electrodes and arrays with fixed electrodes cannot be easily adjusted to provide well isolated units. In these situations, multiple units may be recorded and the assignment of waveforms to units may be ambiguous. At the same time, analysis of such data may be both scientifically important and clinically relevant. In this paper we address this issue using a novel probabilistic model that accounts for several important sources of uncertainty and error in spike sorting. In lieu of sorting neural data to produce a single best spike train, we estimate a probabilistic model of spike trains given the observed data. We show how such a distribution over spike sortings can support standard neuroscientific questions while providing a representation of uncertainty in the analysis. As a representative illustration of the approach, we analyzed primary motor cortical tuning with respect to hand movement in data recorded with a chronic multi-electrode array in non-human primates.We found that the probabilistic analysis generally agrees with human sorters but suggests the presence of tuned units not detected by humans.

pdf preprint pdf from publisher PubMed [BibTex]

Wood, F., Black, M. J. A non-parametric Bayesian alternative to spike sorting J. Neuroscience Methods, 173(1):1–12, August 2008 (article)

pdf preprint pdf from publisher PubMed [BibTex]

Dynamic time warping for binocular hand tracking and reconstruction

Romero, J., Kragic, D., Kyrki, V., Argyros, A.

In IEEE International Conference on Robotics and Automation,ICRA, pages: 2289 -2294, May 2008 (inproceedings)

Pdf [BibTex]

Romero, J., Kragic, D., Kyrki, V., Argyros, A. Dynamic time warping for binocular hand tracking and reconstruction In IEEE International Conference on Robotics and Automation,ICRA, pages: 2289 -2294, May 2008 (inproceedings)

Pdf [BibTex]

Neural control of computer cursor velocity by decoding motor cortical spiking activity in humans with tetraplegia

(J. Neural Engineering Highlights of 2008 Collection)

Kim, S., Simeral, J., Hochberg, L., Donoghue, J. P., Black, M. J.

J. Neural Engineering, 5, pages: 455–476, 2008 (article)

Abstract

Computer-mediated connections between human motor cortical neurons and assistive devices promise to improve or restore lost function in people with paralysis. Recently, a pilot clinical study of an intracortical neural interface system demonstrated that a tetraplegic human was able to obtain continuous two-dimensional control of a computer cursor using neural activity recorded from his motor cortex. This control, however, was not sufficiently accurate for reliable use in many common computer control tasks. Here, we studied several central design choices for such a system including the kinematic representation for cursor movement, the decoding method that translates neuronal ensemble spiking activity into a control signal and the cursor control task used during training for optimizing the parameters of the decoding method. In two tetraplegic participants, we found that controlling a cursor’s velocity resulted in more accurate closed-loop control than controlling its position directly and that cursor velocity control was achieved more rapidly than position control. Control quality was further improved over conventional linear filters by using a probabilistic method, the Kalman filter, to decode human motor cortical activity. Performance assessment based on standard metrics used for the evaluation of a wide range of pointing devices demonstrated significantly improved cursor control with velocity rather than position decoding.

pdf preprint pdf from publisher [BibTex]

Kim, S., Simeral, J., Hochberg, L., Donoghue, J. P., Black, M. J. Neural control of computer cursor velocity by decoding motor cortical spiking activity in humans with tetraplegia J. Neural Engineering, 5, pages: 455–476, 2008 (article)

pdf preprint pdf from publisher [BibTex]

Incremental nonparametric Bayesian regression

Wood, F., Grollman, D. H., Heller, K. A., Jenkins, O. C., Black, M. J.

(CS-08-07), Brown University, Department of Computer Science, 2008 (techreport)

pdf [BibTex]

Wood, F., Grollman, D. H., Heller, K. A., Jenkins, O. C., Black, M. J. Incremental nonparametric Bayesian regression (CS-08-07), Brown University, Department of Computer Science, 2008 (techreport)

pdf [BibTex]

Brownian Warps for Non-Rigid Registration

Mads Nielsen, Peter Johansen, Andrew Jackson, Benny Lautrup, Soren Hauberg

Journal of Mathematical Imaging and Vision, 31, pages: 221-231, Springer Netherlands, 2008 (article)

Publishers site PDF [BibTex]

Mads Nielsen, Peter Johansen, Andrew Jackson, Benny Lautrup, Soren Hauberg Brownian Warps for Non-Rigid Registration Journal of Mathematical Imaging and Vision, 31, pages: 221-231, Springer Netherlands, 2008 (article)

Publishers site PDF [BibTex]

Simultaneous Visual Recognition of Manipulation Actions and Manipulated Objects

Kjellström, H., Romero, J., Martinez, D., Kragic, D.

In European Conference on Computer Vision, ECCV, pages: 336-349, 2008 (inproceedings)

Pdf [BibTex]

Kjellström, H., Romero, J., Martinez, D., Kragic, D. Simultaneous Visual Recognition of Manipulation Actions and Manipulated Objects In European Conference on Computer Vision, ECCV, pages: 336-349, 2008 (inproceedings)

Pdf [BibTex]

Tuning analysis of motor cortical neurons in a person with paralysis during performance of visually instructed cursor control tasks

Kim, S., Simeral, J. D., Hochberg, L. R., Truccolo, W., Donoghue, J., Friehs, G. M., Black, M. J.

2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

Kim, S., Simeral, J. D., Hochberg, L. R., Truccolo, W., Donoghue, J., Friehs, G. M., Black, M. J. Tuning analysis of motor cortical neurons in a person with paralysis during performance of visually instructed cursor control tasks 2008 Abstract Viewer and Itinerary Planner, Society for Neuroscience, Washington, DC, 2008, Online (conference)

[BibTex]

Infinite Kernel Learning

Gehler, P., Nowozin, S.

In Proceedings of NIPS 2008 Workshop on "Kernel Learning: Automatic Selection of Optimal Kernels", 2008 (inproceedings)

project page pdf [BibTex]

Gehler, P., Nowozin, S. Infinite Kernel Learning In Proceedings of NIPS 2008 Workshop on "Kernel Learning: Automatic Selection of Optimal Kernels", 2008 (inproceedings)

project page pdf [BibTex]