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2013


Reconstructing patient-specific cardiac models from contours via Delaunay triangulation and graph-cuts
Reconstructing patient-specific cardiac models from contours via Delaunay triangulation and graph-cuts

Min Wan, Calvin Lim, Junmei Zhang, Yi Su, Si Yong Yeo, Desheng Wang, Ru San Tan, Liang Zhong

In International Conference of the IEEE Engineering in Medicine and Biology Society, pages: 2976-9, 2013 (inproceedings)

[BibTex]

2013

[BibTex]


Regional comparison of left ventricle systolic wall stress reveals intraregional uniformity in healthy subjects
Regional comparison of left ventricle systolic wall stress reveals intraregional uniformity in healthy subjects

Soo Kng Teo, Si Yong Yeo, May Ling Tan, Chi Wan Lim, Liang Zhong, Ru San Tan, Yi Su

In Computing in Cardiology Conference, pages: 575 - 578, 2013 (inproceedings)

Abstract
This study aimed to assess the feasibility of using the regional uniformity of the left ventricle (LV) wall stress (WS) to diagnose patients with myocardial infarction. We present a novel method using a similarity map that measures the degree of uniformity in nominal systolic WS across pairs of segments within the same patient. The values of the nominal WS are computed at each vertex point from a 1-to-1 corresponding mesh pair of the LV at the end-diastole (ED) and end-systole (ES) phases. The 3D geometries of the LV at ED and ES are reconstructed from border-delineated MRI images and the 1-to-1 mesh generated using a strain-energy minimization approach. The LV is then partitioned into 16 segments based on published clinical standard and the nominal WS histogram distribution for each of the segment was computed. A similarity index is then computed for each pair of histogram distributions to generate a 16-by-16 similarity map. Based on our initial study involving 12 MI patients and 9 controls, we observed uniformity for intra- regional comparisons in the controls compared against the patients. Our results suggest that the regional uniformity of the nominal systolic WS in the form of a similarity map can potentially be used as a discriminant between MI patients and normal controls.

[BibTex]

[BibTex]


Class-Specific Hough Forests for Object Detection
Class-Specific Hough Forests for Object Detection

Gall, J., Lempitsky, V.

In Decision Forests for Computer Vision and Medical Image Analysis, pages: 143-157, 11, (Editors: Criminisi, A. and Shotton, J.), Springer, 2013 (incollection)

code Project Page [BibTex]

code Project Page [BibTex]


Image Gradient Based Level Set Methods in 2D and 3D
Image Gradient Based Level Set Methods in 2D and 3D

Xianhua Xie, Si Yong Yeo, Majid Mirmehdi, Igor Sazonov, Perumal Nithiarasu

In Deformation Models: Tracking, Animation and Applications, pages: 101-120, 0, (Editors: Manuel González Hidalgo and Arnau Mir Torres and Javier Varona Gómez), Springer, 2013 (inbook)

Abstract
This chapter presents an image gradient based approach to perform 2D and 3D deformable model segmentation using level set. The 2D method uses an external force field that is based on magnetostatics and hypothesized magnetic interactions between the active contour and object boundaries. The major contribution of the method is that the interaction of its forces can greatly improve the active contour in capturing complex geometries and dealing with difficult initializations, weak edges and broken boundaries. This method is then generalized to 3D by reformulating its external force based on geometrical interactions between the relative geometries of the deformable model and the object boundary characterized by image gradient. The evolution of the deformable model is solved using the level set method so that topological changes are handled automatically. The relative geometrical configurations between the deformable model and the object boundaries contribute to a dynamic vector force field that changes accordingly as the deformable model evolves. The geometrically induced dynamic interaction force has been shown to greatly improve the deformable model performance in acquiring complex geometries and highly concave boundaries, and it gives the deformable model a high invariancy in initialization configurations. The voxel interactions across the whole image domain provide a global view of the object boundary representation, giving the external force a long attraction range. The bidirectionality of the external force field allows the new deformable model to deal with arbitrary cross-boundary initializations, and facilitates the handling of weak edges and broken boundaries.

[BibTex]

[BibTex]


Non-parametric hand pose estimation with object context
Non-parametric hand pose estimation with object context

Romero, J., Kjellström, H., Ek, C. H., Kragic, D.

Image and Vision Computing , 31(8):555 - 564, 2013 (article)

Abstract
In the spirit of recent work on contextual recognition and estimation, we present a method for estimating the pose of human hands, employing information about the shape of the object in the hand. Despite the fact that most applications of human hand tracking involve grasping and manipulation of objects, the majority of methods in the literature assume a free hand, isolated from the surrounding environment. Occlusion of the hand from grasped objects does in fact often pose a severe challenge to the estimation of hand pose. In the presented method, object occlusion is not only compensated for, it contributes to the pose estimation in a contextual fashion; this without an explicit model of object shape. Our hand tracking method is non-parametric, performing a nearest neighbor search in a large database (.. entries) of hand poses with and without grasped objects. The system that operates in real time, is robust to self occlusions, object occlusions and segmentation errors, and provides full hand pose reconstruction from monocular video. Temporal consistency in hand pose is taken into account, without explicitly tracking the hand in the high-dim pose space. Experiments show the non-parametric method to outperform other state of the art regression methods, while operating at a significantly lower computational cost than comparable model-based hand tracking methods.

Publisher site pdf link (url) [BibTex]

Publisher site pdf link (url) [BibTex]

2009


Ball Joints for Marker-less Human Motion Capture
Ball Joints for Marker-less Human Motion Capture

Pons-Moll, G., Rosenhahn, B.

In IEEE Workshop on Applications of Computer Vision (WACV),, December 2009 (inproceedings)

pdf [BibTex]

2009

pdf [BibTex]


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Background Subtraction Based on Rank Constraint for Point Trajectories

Ahmad, A., Del Bue, A., Lima, P.

In pages: 1-3, October 2009 (inproceedings)

Abstract
This work deals with a background subtraction algorithm for a fish-eye lens camera having 3 degrees of freedom, 2 in translation and 1 in rotation. The core assumption in this algorithm is that the background is considered to be composed of a dominant static plane in the world frame. The novelty lies in developing a rank-constraint based background subtraction for equidistant projection model, a property of the fish-eye lens. A detail simulation result is presented to support the hypotheses explained in this paper.

link (url) [BibTex]

link (url) [BibTex]


Parametric Modeling of the Beating Heart with Respiratory Motion Extracted from Magnetic Resonance Images
Parametric Modeling of the Beating Heart with Respiratory Motion Extracted from Magnetic Resonance Images

Pons-Moll, G., Crosas, C., Tadmor, G., MacLeod, R., Rosenhahn, B., Brooks, D.

In IEEE Computers in Cardiology (CINC), September 2009 (inproceedings)

[BibTex]

[BibTex]


Computer cursor control by motor cortical signals in humans with tetraplegia
Computer cursor control by motor cortical signals in humans with tetraplegia

Kim, S., Simeral, J. D., Hochberg, L. R., Donoghue, J. P., Black, M. J.

In 7th Asian Control Conference, ASCC09, pages: 988-993, Hong Kong, China, August 2009 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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ISocRob-MSL 2009 Team Description Paper for Middle Sized League

Lima, P., Santos, J., Estilita, J., Barbosa, M., Ahmad, A., Carreira, J.

13th Annual RoboCup International Symposium 2009, July 2009 (techreport)

Abstract
This paper describes the status of the ISocRob MSL roboticsoccer team as required by the RoboCup 2009 qualification procedures.Since its previous participation in RoboCup, the ISocRob team has car-ried out significant developments in various topics, the most relevantof which are presented here. These include self-localization, 3D objecttracking and cooperative object localization, motion control and rela-tional behaviors. A brief description of the hardware of the ISocRobrobots and of the software architecture adopted by the team is also in-cluded.

[BibTex]

[BibTex]


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Denoising Fluorescence Endoscopy: A Motion-Compensated Temporal Recursive Video Filter with an Optimal Minimum Mean Square Error Parametrization

Stehle, T., Wulff, J., Behrens, A., Gross, S., Aach, T.

Abstract
Fluorescence endoscopy is an emerging technique for the detection of bladder cancer. A marker substance is brought into the patient's bladder which accumulates at cancer tissue. If a suitable narrow band light source is used for illumination, a red fluorescence of the marker substance is observable. Because of the low fluorescence photon count and because of the narrow band light source, only a small amount of light is detected by the camera's CCD sensor. This, in turn, leads to strong noise in the recorded video sequence. To overcome this problem, we apply a temporal recursive filter to the video sequence. The derivation of a filter function is presented, which leads to an optimal filter in the minimum mean square error sense. The algorithm is implemented as plug-in for the real-time capable clinical demonstrator platform RealTimeFrame and it is capable to process color videos with a resolution of 768times576 pixels at 50 frames per second.

pdf link (url) DOI [BibTex]


Fields of Experts
Fields of Experts

Roth, S., Black, M. J.

International Journal of Computer Vision (IJCV), 82(2):205-29, April 2009 (article)

Abstract
We develop a framework for learning generic, expressive image priors that capture the statistics of natural scenes and can be used for a variety of machine vision tasks. The approach provides a practical method for learning high-order Markov random field (MRF) models with potential functions that extend over large pixel neighborhoods. These clique potentials are modeled using the Product-of-Experts framework that uses non-linear functions of many linear filter responses. In contrast to previous MRF approaches all parameters, including the linear filters themselves, are learned from training data. We demonstrate the capabilities of this Field-of-Experts model with two example applications, image denoising and image inpainting, which are implemented using a simple, approximate inference scheme. While the model is trained on a generic image database and is not tuned toward a specific application, we obtain results that compete with specialized techniques.

pdf pdf from publisher [BibTex]

pdf pdf from publisher [BibTex]


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Classification of colon polyps in NBI endoscopy using vascularization features

Stehle, T., Auer, R., Gross, S., Behrens, A., Wulff, J., Aach, T., Winograd, R., Trautwein, C., Tischendorf, J.

In Medical Imaging 2009: Computer-Aided Diagnosis, 7260, (Editors: N. Karssemeijer and M. L. Giger), SPIE, February 2009 (inproceedings)

Abstract
The evolution of colon cancer starts with colon polyps. There are two different types of colon polyps, namely hyperplasias and adenomas. Hyperplasias are benign polyps which are known not to evolve into cancer and, therefore, do not need to be removed. By contrast, adenomas have a strong tendency to become malignant. Therefore, they have to be removed immediately via polypectomy. For this reason, a method to differentiate reliably adenomas from hyperplasias during a preventive medical endoscopy of the colon (colonoscopy) is highly desirable. A recent study has shown that it is possible to distinguish both types of polyps visually by means of their vascularization. Adenomas exhibit a large amount of blood vessel capillaries on their surface whereas hyperplasias show only few of them. In this paper, we show the feasibility of computer-based classification of colon polyps using vascularization features. The proposed classification algorithm consists of several steps: For the critical part of vessel segmentation, we implemented and compared two segmentation algorithms. After a skeletonization of the detected blood vessel candidates, we used the results as seed points for the Fast Marching algorithm which is used to segment the whole vessel lumen. Subsequently, features are computed from this segmentation which are then used to classify the polyps. In leave-one-out tests on our polyp database (56 polyps), we achieve a correct classification rate of approximately 90%.

DOI [BibTex]

DOI [BibTex]


{One-shot scanning using de bruijn spaced grids}
One-shot scanning using de bruijn spaced grids

Ulusoy, A., Calakli, F., Taubin, G.

In Computer Vision Workshops (ICCV Workshops), 2009 IEEE 12th International Conference on, pages: 1786-1792, IEEE, 2009 (inproceedings)

Abstract
In this paper we present a new one-shot method to reconstruct the shape of dynamic 3D objects and scenes based on active illumination. In common with other related prior-art methods, a static grid pattern is projected onto the scene, a video sequence of the illuminated scene is captured, a shape estimate is produced independently for each video frame, and the one-shot property is realized at the expense of space resolution. The main challenge in grid-based one-shot methods is to engineer the pattern and algorithms so that the correspondence between pattern grid points and their images can be established very fast and without uncertainty. We present an efficient one-shot method which exploits simple geometric constraints to solve the correspondence problem. We also introduce De Bruijn spaced grids, a novel grid pattern, and show with strong empirical data that the resulting scheme is much more robust compared to those based on uniform spaced grids.

pdf link (url) DOI [BibTex]

pdf link (url) DOI [BibTex]


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An introduction to Kernel Learning Algorithms

Gehler, P., Schölkopf, B.

In Kernel Methods for Remote Sensing Data Analysis, pages: 25-48, 2, (Editors: Gustavo Camps-Valls and Lorenzo Bruzzone), Wiley, New York, NY, USA, 2009 (inbook)

Abstract
Kernel learning algorithms are currently becoming a standard tool in the area of machine learning and pattern recognition. In this chapter we review the fundamental theory of kernel learning. As the basic building block we introduce the kernel function, which provides an elegant and general way to compare possibly very complex objects. We then review the concept of a reproducing kernel Hilbert space and state the representer theorem. Finally we give an overview of the most prominent algorithms, which are support vector classification and regression, Gaussian Processes and kernel principal analysis. With multiple kernel learning and structured output prediction we also introduce some more recent advancements in the field.

link (url) DOI [BibTex]

link (url) DOI [BibTex]


On feature combination for multiclass object classification
On feature combination for multiclass object classification

Gehler, P., Nowozin, S.

In Proceedings of the Twelfth IEEE International Conference on Computer Vision, pages: 221-228, 2009, oral presentation (inproceedings)

project page, code, data GoogleScholar pdf DOI [BibTex]

project page, code, data GoogleScholar pdf DOI [BibTex]


Estimating human shape and pose from a single image
Estimating human shape and pose from a single image

Guan, P., Weiss, A., Balan, A., Black, M. J.

In Int. Conf. on Computer Vision, ICCV, pages: 1381-1388, 2009 (inproceedings)

Abstract
We describe a solution to the challenging problem of estimating human body shape from a single photograph or painting. Our approach computes shape and pose parameters of a 3D human body model directly from monocular image cues and advances the state of the art in several directions. First, given a user-supplied estimate of the subject's height and a few clicked points on the body we estimate an initial 3D articulated body pose and shape. Second, using this initial guess we generate a tri-map of regions inside, outside and on the boundary of the human, which is used to segment the image using graph cuts. Third, we learn a low-dimensional linear model of human shape in which variations due to height are concentrated along a single dimension, enabling height-constrained estimation of body shape. Fourth, we formulate the problem of parametric human shape from shading. We estimate the body pose, shape and reflectance as well as the scene lighting that produces a synthesized body that robustly matches the image evidence. Quantitative experiments demonstrate how smooth shading provides powerful constraints on human shape. We further demonstrate a novel application in which we extract 3D human models from archival photographs and paintings.

pdf video - mov 25MB video - mp4 10MB YouTube Project Page [BibTex]

pdf video - mov 25MB video - mp4 10MB YouTube Project Page [BibTex]


Segmentation, Ordering and Multi-object Tracking Using Graphical   Models
Segmentation, Ordering and Multi-object Tracking Using Graphical Models

Wang, C., Gorce, M. D. L., Paragios, N.

In IEEE International Conference on Computer Vision (ICCV), 2009 (inproceedings)

pdf [BibTex]

pdf [BibTex]


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Visual Object Discovery

Sinha, P., Balas, B., Ostrovsky, Y., Wulff, J.

In Object Categorization: Computer and Human Vision Perspectives, pages: 301-323, (Editors: S. J. Dickinson, A. Leonardis, B. Schiele, M.J. Tarr), Cambridge University Press, 2009 (inbook)

link (url) [BibTex]

link (url) [BibTex]


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Evaluating the potential of primary motor and premotor cortex for mutltidimensional neuroprosthetic control of complete reaching and grasping actions

Vargas-Irwin, C. E., Yadollahpour, P., Shakhnarovich, G., Black, M. J., Donoghue, J. P.

2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009, Online (conference)

[BibTex]

[BibTex]


Modeling and Evaluation of Human-to-Robot Mapping of Grasps
Modeling and Evaluation of Human-to-Robot Mapping of Grasps

Romero, J., Kjellström, H., Kragic, D.

In International Conference on Advanced Robotics (ICAR), pages: 1-6, 2009 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


no image
Polyp Segmentation in NBI Colonoscopy

Gross, S., Kennel, M., Stehle, T., Wulff, J., Tischendorf, J., Trautwein, C., Aach, T.

Abstract
Endoscopic screening of the colon (colonoscopy) is performed to prevent cancer and to support therapy. During intervention colon polyps are located, inspected and, if need be, removed by the investigator. We propose a segmentation algorithm as a part of an automatic polyp classification system for colonoscopic Narrow-Band images. Our approach includes multi-scale filtering for noise reduction, suppression of small blood vessels, and enhancement of major edges. Results of the subsequent edge detection are compared to a set of elliptic templates and evaluated. We validated our algorithm on our polyp database with images acquired during routine colonoscopic examinations. The presented results show the reliable segmentation performance of our method and its robustness to image variations.

link (url) DOI [BibTex]

link (url) DOI [BibTex]


An additive latent feature model for transparent object recognition
An additive latent feature model for transparent object recognition

Fritz, M., Black, M., Bradski, G., Karayev, S., Darrell, T.

In Advances in Neural Information Processing Systems 22, NIPS, pages: 558-566, MIT Press, 2009 (inproceedings)

pdf slides [BibTex]

pdf slides [BibTex]


Automatic recognition of rodent behavior: A tool for systematic phenotypic analysis
Automatic recognition of rodent behavior: A tool for systematic phenotypic analysis

Serre, T.*, Jhuang, H*., Garrote, E., Poggio, T., Steele, A.

CBCL paper #283/MIT-CSAIL-TR #2009-052., MIT, 2009 (techreport)

pdf [BibTex]

pdf [BibTex]


Let the kernel figure it out; Principled learning of pre-processing for kernel classifiers
Let the kernel figure it out; Principled learning of pre-processing for kernel classifiers

Gehler, P., Nowozin, S.

In Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR), pages: 2836-2843, IEEE Computer Society, 2009 (inproceedings)

doi project page pdf [BibTex]

doi project page pdf [BibTex]


Monocular Real-Time 3D Articulated Hand Pose Estimation
Monocular Real-Time 3D Articulated Hand Pose Estimation

Romero, J., Kjellström, H., Kragic, D.

In IEEE-RAS International Conference on Humanoid Robots, pages: 87-92, 2009 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


Grasp Recognition and Mapping on Humanoid Robots
Grasp Recognition and Mapping on Humanoid Robots

Do, M., Romero, J., Kjellström, H., Azad, P., Asfour, T., Kragic, D., Dillmann, R.

In IEEE-RAS International Conference on Humanoid Robots, pages: 465-471, 2009 (inproceedings)

Pdf Video [BibTex]

Pdf Video [BibTex]


4D Cardiac Segmentation of the Epicardium and Left Ventricle
4D Cardiac Segmentation of the Epicardium and Left Ventricle

Pons-Moll, G., Tadmor, G., MacLeod, R. S., Rosenhahn, B., Brooks, D. H.

In World Congress of Medical Physics and Biomedical Engineering (WC), 2009 (inproceedings)

[BibTex]

[BibTex]


Geometric Potential Force for the Deformable Model
Geometric Potential Force for the Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 20th British Machine Vision Conference, pages: 1-11, 2009 (inproceedings)

Abstract
We propose a new external force field for deformable models which can be conve- niently generalized to high dimensions. The external force field is based on hypothesized interactions between the relative geometries of the deformable model and image gradi- ents. The evolution of the deformable model is solved using the level set method. The dynamic interaction forces between the geometries can greatly improve the deformable model performance in acquiring complex geometries and highly concave boundaries, and in dealing with weak image edges. The new deformable model can handle arbi- trary cross-boundary initializations. Here, we show that the proposed method achieve significant improvements when compared against existing state-of-the-art techniques.

[BibTex]

[BibTex]


Left Ventricular Regional Wall Curvedness and Wall Stress in Patients with Ischemic Dilated Cardiomyopathy
Left Ventricular Regional Wall Curvedness and Wall Stress in Patients with Ischemic Dilated Cardiomyopathy

Liang Zhong, Yi Su, Si Yong Yeo, Ru San Tan Dhanjoo Ghista, Ghassan Kassab

American Journal of Physiology – Heart and Circulatory Physiology, 296(3):H573-84, 2009 (article)

Abstract
Geometric remodeling of the left ventricle (LV) after myocardial infarction is associated with changes in myocardial wall stress. The objective of this study was to determine the regional curvatures and wall stress based on three-dimensional (3-D) reconstructions of the LV using MRI. Ten patients with ischemic dilated cardiomyopathy (IDCM) and 10 normal subjects underwent MRI scan. The IDCM patients also underwent delayed gadolinium-enhancement imaging to delineate the extent of myocardial infarct. Regional curvedness, local radii of curvature, and wall thickness were calculated. The percent curvedness change between end diastole and end systole was also calculated. In normal heart, a short- and long-axis two-dimensional analysis showed a 41 +/- 11% and 45 +/- 12% increase of the mean of peak systolic wall stress between basal and apical sections, respectively. However, 3-D analysis showed no significant difference in peak systolic wall stress from basal and apical sections (P = 0.298, ANOVA). LV shape differed between IDCM patients and normal subjects in several ways: LV shape was more spherical (sphericity index = 0.62 +/- 0.08 vs. 0.52 +/- 0.06, P < 0.05), curvedness at end diastole (mean for 16 segments = 0.034 +/- 0.0056 vs. 0.040 +/- 0.0071 mm(-1), P < 0.001) and end systole (mean for 16 segments = 0.037 +/- 0.0068 vs. 0.067 +/- 0.020 mm(-1), P < 0.001) was affected by infarction, and peak systolic wall stress was significantly increased at each segment in IDCM patients. The 3-D quantification of regional wall stress by cardiac MRI provides more precise evaluation of cardiac mechanics. Identification of regional curvedness and wall stresses helps delineate the mechanisms of LV remodeling in IDCM and may help guide therapeutic LV restoration.

[BibTex]

[BibTex]


Level Set Based Automatic Segmentation of Human Aorta
Level Set Based Automatic Segmentation of Human Aorta

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In International Conference on Computational & Mathematical Biomedical Engineering, pages: 242-245, 2009 (inproceedings)

[BibTex]

[BibTex]


A Curvature-Based Approach for Left Ventricular Shape Analysis from Cardiac Magnetic Resonance Imaging
A Curvature-Based Approach for Left Ventricular Shape Analysis from Cardiac Magnetic Resonance Imaging

Si Yong Yeo, Liang Zhong, Yi Su, Ru San Tan, Dhanjoo Ghista

Medical & Biological Engineering & Computing, 47(3):313-322, 2009 (article)

Abstract
It is believed that left ventricular (LV) regional shape is indicative of LV regional function, and cardiac pathologies are often associated with regional alterations in ventricular shape. In this article, we present a set of procedures for evaluating regional LV surface shape from anatomically accurate models reconstructed from cardiac magnetic resonance (MR) images. LV surface curvatures are computed using local surface fitting method, which enables us to assess regional LV shape and its variation. Comparisons are made between normal and diseased hearts. It is illustrated that LV surface curvatures at different regions of the normal heart are higher than those of the diseased heart. Also, the normal heart experiences a larger change in regional curvedness during contraction than the diseased heart. It is believed that with a wide range of dataset being evaluated, this approach will provide a new and efficient way of quantifying LV regional function.

link (url) [BibTex]

link (url) [BibTex]


In Defense of Orthonormality Constraints for Nonrigid Structure from Motion
In Defense of Orthonormality Constraints for Nonrigid Structure from Motion

Akhter, I., Sheikh, Y., Khan, S.

In Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pages: 2447-2453, 2009 (inproceedings)

Abstract
In factorization approaches to nonrigid structure from motion, the 3D shape of a deforming object is usually modeled as a linear combination of a small number of basis shapes. The original approach to simultaneously estimate the shape basis and nonrigid structure exploited orthonormality constraints for metric rectification. Recently, it has been asserted that structure recovery through orthonormality constraints alone is inherently ambiguous and cannot result in a unique solution. This assertion has been accepted as conventional wisdom and is the justification of many remedial heuristics in literature. Our key contribution is to prove that orthonormality constraints are in fact sufficient to recover the 3D structure from image observations alone. We characterize the true nature of the ambiguity in using orthonormality constraints for the shape basis and show that it has no impact on structure reconstruction. We conclude from our experimentation that the primary challenge in using shape basis for nonrigid structure from motion is the difficulty in the optimization problem rather than the ambiguity in orthonormality constraints.

pdf [BibTex]

pdf [BibTex]


no image
Dynamic distortion correction for endoscopy systems with exchangeable optics

Stehle, T., Hennes, M., Gross, S., Behrens, A., Wulff, J., Aach, T.

In Bildverarbeitung für die Medizin 2009, pages: 142-146, Springer Berlin Heidelberg, 2009 (inproceedings)

Abstract
Endoscopic images are strongly affected by lens distortion caused by the use of wide angle lenses. In case of endoscopy systems with exchangeable optics, e.g. in bladder endoscopy or sinus endoscopy, the camera sensor and the optics do not form a rigid system but they can be shifted and rotated with respect to each other during an examination. This flexibility has a major impact on the location of the distortion centre as it is moved along with the optics. In this paper, we describe an algorithm for the dynamic correction of lens distortion in cystoscopy which is based on a one time calibration. For the compensation, we combine a conventional static method for distortion correction with an algorithm to detect the position and the orientation of the elliptic field of view. This enables us to estimate the position of the distortion centre according to the relative movement of camera and optics. Therewith, a distortion correction for arbitrary rotation angles and shifts becomes possible without performing static calibrations for every possible combination of shifts and angles beforehand.

link (url) DOI [BibTex]

link (url) DOI [BibTex]


no image
Computational mechanisms for the recognition of time sequences of images in the visual cortex

Tan, C., Jhuang, H., Singer, J., Serre, T., Sheinberg, D., Poggio, T.

Society for Neuroscience, 2009 (conference)

pdf [BibTex]

pdf [BibTex]


Interactive Inverse Kinematics for Monocular Motion Estimation
Interactive Inverse Kinematics for Monocular Motion Estimation

Morten Engell-Norregaard, Soren Hauberg, Jerome Lapuyade, Kenny Erleben, Kim S. Pedersen

In The 6th Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS), 2009 (inproceedings)

Conference site Paper site [BibTex]

Conference site Paper site [BibTex]


A Comprehensive Grasp Taxonomy
A Comprehensive Grasp Taxonomy

Feix, T., Pawlik, R., Schmiedmayer, H., Romero, J., Kragic, D.

In Robotics, Science and Systems: Workshop on Understanding the Human Hand for Advancing Robotic Manipulation, 2009 (inproceedings)

Pdf [BibTex]

Pdf [BibTex]


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Population coding of ground truth motion in natural scenes in the early visual system

Stanley, G., Black, M. J., Lewis, J., Desbordes, G., Jin, J., Alonso, J.

COSYNE, 2009 (conference)

[BibTex]

[BibTex]


Segmentation of Human Upper Airway Using a Level Set Based Deformable Model
Segmentation of Human Upper Airway Using a Level Set Based Deformable Model

Si Yong Yeo, Xianghua Xie, Igor Sazonov, Perumal Nithiarasu

In The 13th Medical Image Understanding and Analysis, 2009 (inproceedings)

[BibTex]

[BibTex]


Three Dimensional Monocular Human Motion Analysis in End-Effector Space
Three Dimensional Monocular Human Motion Analysis in End-Effector Space

Soren Hauberg, Jerome Lapuyade, Morten Engell-Norregaard, Kenny Erleben, Kim S. Pedersen

In Energy Minimization Methods in Computer Vision and Pattern Recognition, 5681, pages: 235-248, Lecture Notes in Computer Science, (Editors: Cremers, Daniel and Boykov, Yuri and Blake, Andrew and Schmidt, Frank), Springer Berlin Heidelberg, 2009 (inproceedings)

Publishers site Paper site PDF [BibTex]

Publishers site Paper site PDF [BibTex]


no image
Decoding visual motion from correlated firing of thalamic neurons

Stanley, G. B., Black, M. J., Desbordes, G., Jin, J., Wang, Y., Alonso, J.

2009 Abstract Viewer and Itinerary Planner. Society for Neuroscience, Society for Neuroscience, 2009 (conference)

[BibTex]

[BibTex]

1998


Summarization of video-taped presentations: Automatic analysis of motion and gesture
Summarization of video-taped presentations: Automatic analysis of motion and gesture

Ju, S. X., Black, M. J., Minneman, S., Kimber, D.

IEEE Trans. on Circuits and Systems for Video Technology, 8(5):686-696, September 1998 (article)

Abstract
This paper presents an automatic system for analyzing and annotating video sequences of technical talks. Our method uses a robust motion estimation technique to detect key frames and segment the video sequence into subsequences containing a single overhead slide. The subsequences are stabilized to remove motion that occurs when the speaker adjusts their slides. Any changes remaining between frames in the stabilized sequences may be due to speaker gestures such as pointing or writing, and we use active contours to automatically track these potential gestures. Given the constrained domain, we define a simple set of actions that can be recognized based on the active contour shape and motion. The recognized actions provide an annotation of the sequence that can be used to access a condensed version of the talk from a Web page.

pdf pdf from publisher DOI [BibTex]

1998

pdf pdf from publisher DOI [BibTex]


Robust anisotropic diffusion
Robust anisotropic diffusion

Black, M. J., Sapiro, G., Marimont, D., Heeger, D.

IEEE Transactions on Image Processing, 7(3):421-432, March 1998 (article)

Abstract
Relations between anisotropic diffusion and robust statistics are described in this paper. Specifically, we show that anisotropic diffusion can be seen as a robust estimation procedure that estimates a piecewise smooth image from a noisy input image. The edge-stopping; function in the anisotropic diffusion equation is closely related to the error norm and influence function in the robust estimation framework. This connection leads to a new edge-stopping; function based on Tukey's biweight robust estimator that preserves sharper boundaries than previous formulations and improves the automatic stopping of the diffusion. The robust statistical interpretation also provides a means for detecting the boundaries (edges) between the piecewise smooth regions in an image that has been smoothed with anisotropic diffusion. Additionally, we derive a relationship between anisotropic diffusion and regularization with line processes. Adding constraints on the spatial organization of the line processes allows us to develop new anisotropic diffusion equations that result in a qualitative improvement in the continuity of edges

pdf pdf from publisher [BibTex]

pdf pdf from publisher [BibTex]


The Digital Office: Overview
The Digital Office: Overview

Black, M., Berard, F., Jepson, A., Newman, W., Saund, E., Socher, G., Taylor, M.

In AAAI Spring Symposium on Intelligent Environments, pages: 1-6, Stanford, March 1998 (inproceedings)

pdf [BibTex]

pdf [BibTex]


A framework for modeling appearance change in image sequences
A framework for modeling appearance change in image sequences

Black, M. J., Fleet, D. J., Yacoob, Y.

In Sixth International Conf. on Computer Vision, ICCV’98, pages: 660-667, Mumbai, India, January 1998 (inproceedings)

Abstract
Image "appearance" may change over time due to a variety of causes such as 1) object or camera motion; 2) generic photometric events including variations in illumination (e.g. shadows) and specular reflections; and 3) "iconic changes" which are specific to the objects being viewed and include complex occlusion events and changes in the material properties of the objects. We propose a general framework for representing and recovering these "appearance changes" in an image sequence as a "mixture" of different causes. The approach generalizes previous work on optical flow to provide a richer description of image events and more reliable estimates of image motion.

pdf video [BibTex]

pdf video [BibTex]


Parameterized modeling and recognition of activities
Parameterized modeling and recognition of activities

Yacoob, Y., Black, M. J.

In Sixth International Conf. on Computer Vision, ICCV’98, pages: 120-127, Mumbai, India, January 1998 (inproceedings)

Abstract
A framework for modeling and recognition of temporal activities is proposed. The modeling of sets of exemplar activities is achieved by parameterizing their representation in the form of principal components. Recognition of spatio-temporal variants of modeled activities is achieved by parameterizing the search in the space of admissible transformations that the activities can undergo. Experiments on recognition of articulated and deformable object motion from image motion parameters are presented.

pdf [BibTex]

pdf [BibTex]


Motion feature detection using steerable flow fields
Motion feature detection using steerable flow fields

Fleet, D. J., Black, M. J., Jepson, A. D.

In IEEE Conf. on Computer Vision and Pattern Recognition, CVPR-98, pages: 274-281, IEEE, Santa Barbara, CA, 1998 (inproceedings)

Abstract
The estimation and detection of occlusion boundaries and moving bars are important and challenging problems in image sequence analysis. Here, we model such motion features as linear combinations of steerable basis flow fields. These models constrain the interpretation of image motion, and are used in the same way as translational or affine motion models. We estimate the subspace coefficients of the motion feature models directly from spatiotemporal image derivatives using a robust regression method. From the subspace coefficients we detect the presence of a motion feature and solve for the orientation of the feature and the relative velocities of the surfaces. Our method does not require the prior computation of optical flow and recovers accurate estimates of orientation and velocity.

pdf [BibTex]

pdf [BibTex]


{PLAYBOT}: A visually-guided robot for physically disabled children
PLAYBOT: A visually-guided robot for physically disabled children

Tsotsos, J. K., Verghese, G., Dickinson, S., Jenkin, M., Jepson, A., Milios, E., Nuflo, F., Stevenson, S., Black, M., Metaxas, D., Culhane, S., Ye, Y., Mann, R.

Image & Vision Computing, Special Issue on Vision for the Disabled, 16(4):275-292, 1998 (article)

Abstract
This paper overviews the PLAYBOT project, a long-term, large-scale research program whose goal is to provide a directable robot which may enable physically disabled children to access and manipulate toys. This domain is the first test domain, but there is nothing inherent in the design of PLAYBOT that prohibits its extension to other tasks. The research is guided by several important goals: vision is the primary sensor; vision is task directed; the robot must be able to visually search its environment; object and event recognition are basic capabilities; environments must be natural and dynamic; users and environments are assumed to be unpredictable; task direction and reactivity must be smoothly integrated; and safety is of high importance. The emphasis of the research has been on vision for the robot this is the most challenging research aspect and the major bottleneck to the development of intelligent robots. Since the control framework is behavior-based, the visual capabilities of PLAYBOT are described in terms of visual behaviors. Many of the components of PLAYBOT are briefly described and several examples of implemented sub-systems are shown. The paper concludes with a description of the current overall system implementation, and a complete example of PLAYBOT performing a simple task.

pdf pdf from publisher DOI [BibTex]

pdf pdf from publisher DOI [BibTex]


Visual surveillance of human activity
Visual surveillance of human activity

L. Davis, S. F., Harwood, D., Yacoob, Y., Hariatoglu, I., Black, M.

In Asian Conference on Computer Vision, ACCV, 1998 (inproceedings)

pdf [BibTex]

pdf [BibTex]


A Probabilistic framework for matching temporal trajectories: Condensation-based recognition of gestures and expressions
A Probabilistic framework for matching temporal trajectories: Condensation-based recognition of gestures and expressions

Black, M. J., Jepson, A. D.

In European Conf. on Computer Vision, ECCV-98, pages: 909-924, Freiburg, Germany, 1998 (inproceedings)

pdf [BibTex]

pdf [BibTex]